the best private boat tours Malta- blue waters, red roof popeye village, sand beach, Malta

13 Best Private Boat Tours To Book In Malta 2026

Looking for the best private boat tour Malta has to offer? You are in the right place!

Malta is a fantastic place for a getaway with its all-year-round excellent weather and endless things to do. And what better way to discover Malta and its Islands than from a private boat tour?

I have been to Malta and trust me, having your own boat will make your trip so much more enjoyable.


Snorkelling and snacks private boat to blue lagoon Malta, blue water, cliff side views

Don’t have time to read the whole article?

Book This Snorkelling & Snacks Private Boat Adventure in Malta and Gozo– With Glowing 5 ⭐️ Ratings!


Not only will you be able to escape the crowds but be able to see sites only accessible by water. The private boat tours I did were the best part of my trip when visiting Malta so I highly recommend booking one!

From snorkelling adventures to romantic sunset tours, Malta has a variety of private boat tours that will suit everyone.

Here are the top 13 Private Malta boat tours you should consider booking that’ll make your vacation unforgettable!

#1 TOP PICK
Snorkelling and snacks private boat to blue lagoon Malta, blue water, cliff side views

Snorkelling & Snacks Private Boat To Blue Lagoon And Other Malta Spots

✔️Appetizers And Wine

✔️ Paddleboard & Snorkeling Equipment

✔️ Local Hidden Gems

✔️ Only Has 5-Star Reviews!

#2 PICK
Full-Day Private Boat Charter in Malta, Gozo & Comino, blue water, deckchairs, grey cliff edge into water, Malta

Private Boat Charter to Comino Blue Lagoon

⭐️⭐️⭐️⭐️⭐️

✔️Snacks, Drinks & Swimming Equipment

✔️ BBQ To Cook Your Own Food

#3 PICK
Private Sailing Boat Charter With Paddleboarding in Malta, blue and clear water, sandy sea floor, paddleboarding, people, Malta

Private Sailing Boat Charter With Paddleboarding

✔️Snorkel Gear And Stand-Up paddleboards

✔️ BBQ On Request

✔️Local Captain & Guide

Why Book A Private Boat Tour In Malta?

Good question-and from my experiences I have so many great reasons why you should!

To start, there are so many epic places to explore in Malta, but unfortunately some of them, you can only see by boat. I loved exploring these hidden gems but on a normal boat tour, you don’t usually get the chance to swim or properly stop at them.

However, with a private boat tour many of them will find you a fully private area for you to swim and enjoy each one!

If you are travelling with someone else or as a large group, private boat tours also usually work out cheaper than most other tours as many include hotel pick-ups, food, drinks, snorkelling gear and professional staff to guide you through the waters.

The main advantage for me though was most Captains and Skippers are actually locals.

So not only will they know the best spots to visit that most visitors wouldn’t dream of visiting, but they will plan the most incredible itinerary based on your exact wants and needs!

1. The Best Private Malta Boat Tour From Valletta

The Best Private Malta Boat Tour From Valletta, bright blue water, boat, swimmers, Malta

⭐️ Rating: 5 Out Of 5 Stars(62+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 11 people
-Swimming and snorkelling
-Beverages
-You Can Order Food In Advance
-Professional and thoughtful Captain and Guide
-You can fully customise the route

Why pick this tour? This is the ultimate boat trip from Valletta that allows you to see the best sites including Crystal Lagoon of Comino, the famous Blue Lagoon, St Peter’s Pool and more!

This beautiful boat has the most friendly staff who want to help you have the most incredible trip to Malta. So expect to be taken to the best spots around the Island that are perfect for swimming.

By far the best part of the holiday! So attentive to the little detail and made every part perfect. We explored all the lovely areas and didn’t miss a thing! (Read More Reviews Here)

This tour can be tailored to your every want and need so is incredible value for money. Just remember to bring your camera because you will be seeing the most hidden stunning sites!

2. The Best Luxury Private Boat Tour Malta

The Best Luxury Private Boat Tour Malta, blue waters, boat, champagne

⭐️ Rating: 5 Out Of 5 Stars (8+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 8 people
-No hidden fees
-Bottled water
-Lunch plans can be made for you
-Snorkelling equipment & Paddleboard

Why pick this tour? There is no better way to explore Malta than on your private 41ft Cabin cruiser!

With a professional crew that will plan your day to your exact likes and needs, you will get to see all the hidden gems surrounding Malta, Blue Lagoon, Comino and more on your own terms.

Amazing day – beautiful weather, stunning scenery, fantastic boat and a great crew! Highly recommended. (Read More Reviews Here)

If you want to explore the clear waters surrounding the Islands without any of the crowds, this is the best tour for you. For swimming I think it’s best to visit from May onwards, so keep that in mind before booking!

3. Snorkelling & Snacks Private Boat To Blue Lagoon And Other Malta Spots

Snorkelling and snacks private boat to blue lagoon Malta, blue water, cliff side views

⭐️ Rating: 5 Out Of 5 Stars(70+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

– Knowledgeable, caring and a wonderful staff
-Swimming and snorkelling equipment
-Stand-up paddleboard available
-Appetizers and wine
-The best spots for exploring the water throughout Gozo, Comino and the Blue Lagoon

Why pick this tour? Not many private boat tours provide wine, snacks and the best spots for swimming, snorkelling and paddleboarding. But this one does!

You will get to explore the best of Gozo, Comino and the Blue Lagoon with experienced staff and zero crowds.

It’s also a great option for anyone travelling to Malta from another place like Sicily and it is short on time!

You will also get to watch the sun setting over Malta with wine and your own private spot.

The skipper is calm, knowledgeable, caring and a wonderful host. Lunch cooked by the skipper was effortless and excellent!! Wines and beers and water constantly available. (Read More Reviews Here)

This is a great boat trip for honeymoons or anyone wanting to add more romance to their trip!

The traditional Maltese lunch is worth trying! With dishes like dips, quiche, swordfish, pasta and wine, your trip will be made even more unforgettable.

4. Half-Day Blue Lagoon, Comino and Gozo Boat Trip

Half-Day Blue Lagoon, Comino and Gozo Boat Trip, blue water, cliffs, cove, Malta

⭐️ Rating: 5 Out Of 5 Stars(101+ Reviews) | ⏳ Tour Length: 3 Hours | 🌊 BOOK NOW

This Tour Includes:

-Friendly and knowledgeable guide
– For up to 6 People
-Swimming and snorkelling
-Experience offered in English and Italian
– Chance for an adventurous Cliff Diving opportunity
-Service animals allowed

Why pick this tour? If you don’t want to spend a whole day at sea but still want to see the most beautiful sites, this is the boat trip you need to book!

With hotel pick-ups available and a local guide, your private charter will take you to the best caves, secluded beaches, and bays surrounding Gozo, Comino and Crystal Lagoon.

A lot was done in 3 hours and couldn’t be happier. Plus, always getting away from the large crowds was a bonus.! (Read More Reviews Here)

 The snorkelling stop allows you to see everything in its natural habitat, without the crowds. And as the Cominotto Reef has a thriving marine life, you may even see some octopuses!

5. Private 8 -Hour Catamaran Charter

Full-Day Private Boat Charter in Malta, Gozo & Comino, blue water, deckchairs, grey cliff edge into water, Malta

⭐️ Rating: 5 Out Of 5 Stars (3+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

-Crew that prides itself on safety
-WIFI & Swimming Equipment
-Unlimited water and soft drinks
-Experienced skipper
-BBQ facilities

Why pick this tour? This private boat tour is a great way to enjoy Malta’s beautiful sea without any crowds.

The knowledgeable and passionate Captain is a reason why visitors love this tour so much!

An amazing catamaran charter! Very clean and modern boat, attentive captain, and a perfect trip to Gozo and Comino. Well-planned itinerary, nice beaches, good food and music. Highly recommend for a day of luxury and relaxation. (Read More Reviews Here)

During your trip, you will experience the very best hidden gems and spots around Malta, Comino, Gozo, and their surrounding bays.

This tour stands out as a firm favourite because of the company’s love of Mediterranean marine life and passion for keeping guests safe at all times.

6. Best Private Sunset Boat Tour Of Malta, Comino And Gozo

Best Private Sunset Boat Tour Of Malta, Comino And Gozo, sunset, orange sky, blue sea, Malta

⭐️ Rating: 5 Out Of 5 Stars( 30+ Reviews) | ⏳ Tour Length: 3 Hours | 🌊 BOOK NOW

This Tour Includes:

-Malta’s top sights at the most magical time of day 
-Undivided attention of your personal captain and crew
-Can tailor your itinerary
-Snorkel & mask
-Easy communication over WhatsApp

Why pick this tour? Malta looks incredible during sunset, so there is no better way to swim, snorkel or explore sites like the Blue Grotto at this time of day.

Oh my gosh, this was the BEST excursion EVER! Our guide, Frank, was so great! (Read More Reviews Here)

With your own private boat and incredible crew on hand, this will be the best experience you have in Malta!

This is one of the best romantic private boat tour options available, but just be aware that fuel is not included which is an extra 79 euros.

7. Private Sailing Boat Charter With Paddleboarding

Private Sailing Boat Charter With Paddleboarding in Malta, blue and clear water, sandy sea floor, paddleboarding, people, Malta

⭐️ Rating: 5 Out Of 5 Stars(519+ Reviews) | ⏳ Tour Length: 9 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 4 people
-Snorkel gear and stand-up paddleboards
-Bottled Water
-Professional and friendly Captian and Guide
-More drinks and a generous barbecue meal are available on request

Why pick this tour? This is a fantastic private option to explore locations only accessible by boat. And if you are a lover of snorkelling, swimming and paddleboarding, it doesn’t get much better than this tour!

This private sailing boat was definitely a highlight of our trip to Malta! The booking process was easy. We received all information/details well in advance and helped us prepare for our day! (Read More Reviews Here)

Your trip is personalized so no one will have an experience like yours. Your luxury day trip can include stops at the Blue Lagoon, Crystal Lagoon, hidden sea caves, Gozo or anywhere else you want to explore in Malta.

If you want to see all the major spots but avoid the crowds, this is one tour that will guarantee that!

8. Snorkeling & Beaches Private Boat Tour

Snorkeling & Beaches Private Boat Tour Malta, clear waters, yellow sand, rocks, Paradise bay, Malta

⭐️ Rating: 4.5 Out Of 5 Stars(36+ Reviews) | ⏳ Tour Length: 4-7 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 15 people
-Swimming and snorkelling
-Hotel Pickup offered
-Fantastic Guide
-Available in multiple languages

Why pick this tour? There is no better way to explore the beaches and waters of Malta than with a local guide. And with plenty of time at each beach and the chance to see the sunset at Golden Bay, this is the perfect private boat trip for all.

This is one of the best private boat options you get to visit Blue Lagoon, Coral Lagoon, Santa Marija Caves, Comino and San Niklaw Bay without the crowds. I love visiting Malta but you will find in the summer it gets super crowded so this is the best way to see the top sites.

We had a wonderful day! My personal favorite was swimming under a huge arch into a cave that had a ceiling open to the sky. Incredible! (Read More Reviews Here)

This tour also includes off-the-beaten-track locations that most visitors do not get the chance to see. And all fuel costs are included!

And as there are no sharks in Malta, you will be able to explore the waters worry-free!

9. Best Private Sailing Charter For Large Groups

Best Private Sailing Charter For Large Groups in Malta, people swimming, snorkels, clear water in Malta

⭐️ Rating: 5 Out Of 5 Stars(32+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 10 people
-Swimming, snorkelling & Paddleboarding
-Tea, Coffee & Water
-Professional and thoughtful Captain and Guide
-BBQ for your use

Why pick this tour? For a more personalised experience and the chance to visit the hidden bays around Malta, book this tour!

We had a relaxing day. It was an amazing experience in Comino Blue Lagoon. Paul is a very friendly and experienced skipper. I highly recommend Yacht Charters Malta. We’ll definitely go again next summer. (Read More Reviews Here)

This is a really popular tour for families and groups because of the great selection of equipment you are offered to explore the clear waters.

10. Private Boat Tour From Mellieħa

Private Boat Tour From Mellieħa, Malta, flamingo pink inflatable, blue sky, blue clear water

⭐️ Rating: 5 Out Of 5 Stars (65+ Reviews) | ⏳ Tour Length: 3 Hours | 🌊 BOOK NOW

This Tour Includes:

-Half-day charter for up to 6 people
-Swimming and snorkelling
-Bottled water
-Great Captian and Guide
-You can fully customise the route

Why pick this tour? With stops including Blue Lagoon, Comino Island & the southern parts of Gozo, you get to experience a lot in only a few hours!

By far the best part of the holiday! So attentive to the little detail and made every part perfect. We explored all the lovely areas and didn’t miss a thing! (Read More Reviews Here)

Whether you want to relax under the Canopy for shade, snorkel or cliff dive, this tour offers something for everyone. If you don’t want to dedicate a whole day to being on the water, this is the perfect tour to book.

11. Sailing Charter With Lunch And Drinks

Sailing Charter With Lunch And Drinks Malta, blue water, coastline, church on cliff

⭐️ Rating: 4.5 Out Of 5 Stars(11+ Reviews) | ⏳ Tour Length: 8 Hours | 🌊 BOOK NOW

This Tour Includes:

-Full-day charter for up to 6 people
-Swimming and snorkelling
-Home-cooked lunch and soft drinks
-Fantastic local Captain and crew
-Can be picked up from your hotel

Why pick this tour? For a day exploring out-of-the-way spots around Malta and a fantastic meal provided, this is an unforgettable experience for all.

Including a swim platform, you will have plenty of chances to snorkel and swim in the hidden coves and lagoons throughout the Maltese Islands. I loved exploring the hidden coves but many of them you cannot reach without booking a boat tour like this one!

 We had an amazing experience checking out the blue lagoon and sailing along the coast. Super personable as well. Highly recommend (Read More Reviews Here)

 This private boat trip in Malta has a great crew. They are very knowledgeable about the area and its history. They are also super easy to talk to as well!

12. 2-Hour Malta Highlights Private Boat Trip

best private boat trips in Malta to see Popeyes Village- blue waters, red roofed wood houses, overlooking Anchor bay, Malta

⭐️ Rating: 5 Out Of 5 Stars(524+ Reviews) | ⏳ Tour Length: 2 Hours | 🌊 BOOK NOW

This Tour Includes:

-Private tour for up to 6 people
-Use of Snorkelling equipment
-Pick-up offered
-Informative and friendly local captain
-You can fully customise the itinerary

Why pick this tour? This is one of the best private boat tour options if you want a budget-friendly way to explore Malta in a short amount of time.

You will visit sites like the Blue Lagoon, Crystal Lagoon and more by dropping anchor far from the big crowds. And with snorkelling equipment included, you will have chances to explore the best private swimming spots in the area.

We had the BEST time. Tour guide was awesome & accommodating. Got to the see such beautiful sceneries. Would definitely recommend this and will be coming back if we visit Malta again! (Read More Reviews Here)

Make sure you bring a camera because you will get to see the most amazing hidden spots around Malta!

13. Island Highlights In 2 Hours- Private Boat Tour With Female Captain

 Full-Day Private Boat Trip From St Paul's Bay, Malta- blue sea, cliff edge, Malta

⭐️ Rating: 5 Out Of 5 Stars(10+ Reviews)| ⏳ Tour Length: 2 Hours | 🌊 BOOK NOW

This Tour Includes:

-Tour if for up to 6 people
-Blue Lagoon, Crystal Lagoon, Santa Maria, Hondoq Bay, the island of Comino
-Experienced female captain
-Fresh Water Shower
-Bluetooth Sound System (to connect your device)

Why pick this tour?

Wherever you are staying in Malta, this trip is easy to do because of the two meeting points of Mgarr Harbour or Cirkewwa Ferry Terminal.

The highlight of this trip is the staff on this private boat service. They are incredibly welcoming and they will give you the heads up on which bays or secluded beaches are best for the day!

Outstanding, Jolene was the perfect skipper and took great care of us. Definitely a highlight of our trip, if you come to Malta you need to swim in the Blue Lagoon. (Read More Reviews Here)

You will visit picturesque bays and caves such as the Blue Lagoon, Crystal Lagoon, Santa Maria, Hondoq Bay and the island of Comino. Your captain also knows many other local gems which makes this tour itinerary up there with the best.

The atmosphere is really relaxing as you can swim in the turquoise water, snorkel among the fish or just enjoy a drink on the boat!

Private Boat Tours In Malta FAQ

I’m sure you have a few more questions before deciding which private boat tour to book- I know I did!

There are so many boat tour options around Malta, Gozo and Blue Lagoon it can be hard to know which one will suit you the best. I did so much research before booking mine and realised there were a few things I wanted to clear up before hitting that book now button.

To help you experience Malta in the best way, here are the most frequently asked questions and answers travellers just like you and I have:

What are the main islands you visit on a Malta boat tour?

It depends on what boat trip you book. However, the majority will take you around the Islands of Malta, Gozo and Comino. You may also get to visit some great places on the way like Blue and Crystal Lagoon.

When is the best time of year for a boat tour in Malta?

The summer months are a great time to book, but the temperatures can get unbearable. For the most enjoyable experience, it’s recommended to book a boat tour in June or September. During these months you will get great weather, fewer crowds and sometimes better deals.

How much does it cost to go to the Blue Cave Malta?

There is a ticket booth where you can purchase your tickets before going. It costs €8.00 for Adults and €4.00 for Children. Just check the weather first before going as if conditions are bad you cannot visit.

Can you get to the Blue Cave without a tour?

It is possible to visit Malta’s Blue Cave without a tour as you can buy tickets there. However, you cannot go alone. You will still need to go on the boat with a trained skipper to keep you safe.

Can you kayak to the Blue Grotto Malta?

Absolutely and it is one of the best ways to explore the Blue Grotto. This way allows you to explore at your own pace and gives you the chance to swim in the waters as many boat tours don’t give you a chance to swim here.

Can you go to Blue Lagoon on your own?

You do not need to book a private tour of Malta’s Blue Lagoon, but it is highly recommended. If you prefer to get there on your own you can take a quick ferry from Gozo (15-minute ferry) or Cirkewwa (25-minute ferry ride).

Can you swim in the Blue Lagoon Malta?

You can swim in Malta’s Blue Lagoon with no problems because it is a stunning sheltered area with the bluest waters. Just keep in mind that it is a really popular place for tourists to swim, especially in the Summer months.

The Best Private Boat Tour Malta Options Final Thoughts

If you are looking to experience the very best of Malta, there is no better way than on a private boat tour!

Full of hidden coves, secluded beaches and off-the-beaten-track swimming spots, Malta’s coastline is a paradise. The weather is also so fantastic that you can even do these tours and swim during the winter!

But a lot of the spots are only accessible by boat and not known by many tourists, this is why I enjoyed seeing Malta in this amazing way.

To avoid the crowds and have your own tailored experience by a true local, a private trip will make your getaway unforgettable. Whether you book a 3-hour boat excursion or a full-day boat trip to Gozo and Blue Lagoon, I’m sure you will enjoy exploring the Mediterranean waters as much as I did.

No matter if you have booked to stay in Gozo for a week or you are in St Paul’s Bay for a day, there is the perfect boat tour available for you!

I Highly Recommend Booking THIS Private Boat Tour!

✔️How to reach Gozo from Malta Airport

✔️How To Get From Valletta To Popeye Village

✔️Sicily Or Malta? Which Should Be Your Next Destination

✔️ Getting From Malta Airport To Sliema

✔️Best British Airways Cabin Bag For Your Next Flight

✔️ Must-Have Travel Items For Europe (From A European)

1 thought on “13 Best Private Boat Tours To Book In Malta 2026”

  1. Pingback: 16 Awesome Places With The Best Snorkeling In Europe - Between England & Everywhere

Leave a Comment